Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CXCR4P61073 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CXCR4P61073 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.13■□□□□ 0.33
CXCR4P61073 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CXCR4P61073 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CXCR4P61073 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.12■□□□□ 0.33
CXCR4P61073 AC124283.5-201ENST00000624661 1809 ntBASIC17.12■□□□□ 0.33
CXCR4P61073 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.12■□□□□ 0.33
CXCR4P61073 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CXCR4P61073 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.12■□□□□ 0.33
CXCR4P61073 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CXCR4P61073 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.12■□□□□ 0.33
CXCR4P61073 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.12■□□□□ 0.33
CXCR4P61073 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CXCR4P61073 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.12■□□□□ 0.33
CXCR4P61073 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.12■□□□□ 0.33
CXCR4P61073 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.12■□□□□ 0.33
CXCR4P61073 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.12■□□□□ 0.33
CXCR4P61073 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CXCR4P61073 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CXCR4P61073 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
CXCR4P61073 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.12■□□□□ 0.33
CXCR4P61073 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CXCR4P61073 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CXCR4P61073 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.11■□□□□ 0.33
CXCR4P61073 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CXCR4P61073 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.11■□□□□ 0.33
CXCR4P61073 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CXCR4P61073 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.11■□□□□ 0.33
CXCR4P61073 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.11■□□□□ 0.33
CXCR4P61073 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CXCR4P61073 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.11■□□□□ 0.33
CXCR4P61073 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.11■□□□□ 0.33
CXCR4P61073 AC080038.1-201ENST00000611274 1154 ntBASIC17.11■□□□□ 0.33
CXCR4P61073 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 AL050303.2-201ENST00000619798 666 ntBASIC17.11■□□□□ 0.33
CXCR4P61073 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.11■□□□□ 0.33
CXCR4P61073 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.11■□□□□ 0.33
CXCR4P61073 AC073111.5-205ENST00000641717 521 ntBASIC17.11■□□□□ 0.33
CXCR4P61073 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.11■□□□□ 0.33
CXCR4P61073 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CXCR4P61073 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CXCR4P61073 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.11■□□□□ 0.33
CXCR4P61073 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 AC012313.1-201ENST00000593393 3059 ntBASIC17.1■□□□□ 0.33
CXCR4P61073 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CXCR4P61073 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CXCR4P61073 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CXCR4P61073 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CXCR4P61073 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 AC141586.5-201ENST00000624546 2050 ntBASIC17.1■□□□□ 0.33
CXCR4P61073 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CXCR4P61073 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.1■□□□□ 0.33
CXCR4P61073 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.1■□□□□ 0.33
CXCR4P61073 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.1■□□□□ 0.33
CXCR4P61073 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.1■□□□□ 0.33
CXCR4P61073 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.1■□□□□ 0.33
CXCR4P61073 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.1■□□□□ 0.33
CXCR4P61073 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms