Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN20P56880 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CLDN20P56880 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN20P56880 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN20P56880 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN20P56880 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN20P56880 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.22■□□□□ 0.35
CLDN20P56880 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN20P56880 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN20P56880 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN20P56880 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN20P56880 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 AIRN-201ENST00000601203 4374 ntBASIC17.22■□□□□ 0.35
CLDN20P56880 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN20P56880 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLDN20P56880 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN20P56880 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLDN20P56880 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLDN20P56880 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLDN20P56880 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN20P56880 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.21■□□□□ 0.35
CLDN20P56880 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN20P56880 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN20P56880 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN20P56880 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLDN20P56880 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN20P56880 AC010947.1-201ENST00000623454 693 ntBASIC17.21■□□□□ 0.35
CLDN20P56880 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN20P56880 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLDN20P56880 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN20P56880 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN20P56880 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN20P56880 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLDN20P56880 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN20P56880 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN20P56880 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN20P56880 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN20P56880 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN20P56880 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 NAPSB-206ENST00000562112 1266 ntBASIC17.2■□□□□ 0.34
CLDN20P56880 CKBP1-201ENST00000565489 1086 ntBASIC17.2■□□□□ 0.34
CLDN20P56880 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN20P56880 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLDN20P56880 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN20P56880 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN20P56880 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN20P56880 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN20P56880 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CLDN20P56880 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN20P56880 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CLDN20P56880 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN20P56880 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLDN20P56880 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CLDN20P56880 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN20P56880 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CLDN20P56880 TSPY23P-201ENST00000440136 739 ntBASIC17.19■□□□□ 0.34
CLDN20P56880 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.19■□□□□ 0.34
CLDN20P56880 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms