Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
WNT3AP56704 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
WNT3AP56704 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
WNT3AP56704 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.98■□□□□ 0.63
WNT3AP56704 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
WNT3AP56704 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
WNT3AP56704 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.98■□□□□ 0.63
WNT3AP56704 GPAT2P1-201ENST00000444924 1672 ntBASIC18.98■□□□□ 0.63
WNT3AP56704 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
WNT3AP56704 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.97■□□□□ 0.63
WNT3AP56704 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.97■□□□□ 0.63
WNT3AP56704 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.97■□□□□ 0.63
WNT3AP56704 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
WNT3AP56704 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.97■□□□□ 0.63
WNT3AP56704 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.97■□□□□ 0.63
WNT3AP56704 AL023803.3-201ENST00000615559 522 ntBASIC18.97■□□□□ 0.63
WNT3AP56704 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
WNT3AP56704 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.97■□□□□ 0.63
WNT3AP56704 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.97■□□□□ 0.63
WNT3AP56704 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 WIZP1-201ENST00000531444 2299 ntBASIC18.97■□□□□ 0.63
WNT3AP56704 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
WNT3AP56704 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
WNT3AP56704 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
WNT3AP56704 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 AL109659.2-201ENST00000606809 1674 ntBASIC18.96■□□□□ 0.63
WNT3AP56704 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.96■□□□□ 0.63
WNT3AP56704 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 AL357033.4-201ENST00000617703 1807 ntBASIC18.96■□□□□ 0.63
WNT3AP56704 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.96■□□□□ 0.63
WNT3AP56704 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.96■□□□□ 0.63
WNT3AP56704 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 SLC25A1P2-201ENST00000430693 912 ntBASIC18.96■□□□□ 0.63
WNT3AP56704 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.96■□□□□ 0.63
WNT3AP56704 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.96■□□□□ 0.63
WNT3AP56704 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
WNT3AP56704 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.96■□□□□ 0.63
WNT3AP56704 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.96■□□□□ 0.63
WNT3AP56704 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
WNT3AP56704 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.96■□□□□ 0.63
WNT3AP56704 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.96■□□□□ 0.63
WNT3AP56704 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
WNT3AP56704 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
WNT3AP56704 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
WNT3AP56704 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.95■□□□□ 0.62
WNT3AP56704 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
WNT3AP56704 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.95■□□□□ 0.62
WNT3AP56704 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
WNT3AP56704 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 AC008556.1-201ENST00000610908 2040 ntBASIC18.95■□□□□ 0.62
WNT3AP56704 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.95■□□□□ 0.62
WNT3AP56704 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 KRT8P9-201ENST00000558927 1449 ntBASIC18.95■□□□□ 0.62
WNT3AP56704 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.95■□□□□ 0.62
WNT3AP56704 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.95■□□□□ 0.62
WNT3AP56704 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.95■□□□□ 0.62
WNT3AP56704 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.95■□□□□ 0.62
WNT3AP56704 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.95■□□□□ 0.62
WNT3AP56704 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
WNT3AP56704 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.95■□□□□ 0.62
WNT3AP56704 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
WNT3AP56704 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.95■□□□□ 0.62
WNT3AP56704 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
WNT3AP56704 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
WNT3AP56704 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms