Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAD23BP54727 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAD23BP54727 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.08■□□□□ 0.81
RAD23BP54727 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.08■□□□□ 0.81
RAD23BP54727 AC007663.1-201ENST00000438948 1240 ntBASIC20.08■□□□□ 0.81
RAD23BP54727 CCR12P-201ENST00000446203 998 ntBASIC20.08■□□□□ 0.81
RAD23BP54727 TSPY17P-201ENST00000450329 467 ntBASIC20.08■□□□□ 0.81
RAD23BP54727 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RAD23BP54727 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.08■□□□□ 0.81
RAD23BP54727 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.08■□□□□ 0.81
RAD23BP54727 AC116562.4-202ENST00000641738 218 ntBASIC20.08■□□□□ 0.81
RAD23BP54727 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.08■□□□□ 0.8
RAD23BP54727 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAD23BP54727 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAD23BP54727 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAD23BP54727 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAD23BP54727 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.08■□□□□ 0.8
RAD23BP54727 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAD23BP54727 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAD23BP54727 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.07■□□□□ 0.8
RAD23BP54727 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.07■□□□□ 0.8
RAD23BP54727 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.07■□□□□ 0.8
RAD23BP54727 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.07■□□□□ 0.8
RAD23BP54727 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 AP003041.3-201ENST00000527151 707 ntBASIC20.07■□□□□ 0.8
RAD23BP54727 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.07■□□□□ 0.8
RAD23BP54727 MIR4674-201ENST00000582457 87 ntBASIC20.07■□□□□ 0.8
RAD23BP54727 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 AC083906.6-201ENST00000641366 219 ntBASIC20.07■□□□□ 0.8
RAD23BP54727 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RAD23BP54727 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAD23BP54727 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.07■□□□□ 0.8
RAD23BP54727 GPAT2P1-201ENST00000444924 1672 ntBASIC20.07■□□□□ 0.8
RAD23BP54727 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RAD23BP54727 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RAD23BP54727 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAD23BP54727 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.06■□□□□ 0.8
RAD23BP54727 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAD23BP54727 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.06■□□□□ 0.8
RAD23BP54727 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
RAD23BP54727 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RAD23BP54727 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAD23BP54727 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAD23BP54727 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.06■□□□□ 0.8
RAD23BP54727 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RAD23BP54727 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.06■□□□□ 0.8
RAD23BP54727 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.06■□□□□ 0.8
RAD23BP54727 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.06■□□□□ 0.8
RAD23BP54727 AC068587.9-201ENST00000641814 219 ntBASIC20.06■□□□□ 0.8
RAD23BP54727 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAD23BP54727 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
RAD23BP54727 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.06■□□□□ 0.8
RAD23BP54727 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAD23BP54727 LINC01568-207ENST00000641790 1380 ntBASIC20.06■□□□□ 0.8
RAD23BP54727 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.06■□□□□ 0.8
RAD23BP54727 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAD23BP54727 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.06■□□□□ 0.8
RAD23BP54727 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAD23BP54727 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAD23BP54727 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.05■□□□□ 0.8
RAD23BP54727 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAD23BP54727 AL023284.2-201ENST00000405850 579 ntBASIC20.05■□□□□ 0.8
RAD23BP54727 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAD23BP54727 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.05■□□□□ 0.8
RAD23BP54727 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAD23BP54727 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.05■□□□□ 0.8
RAD23BP54727 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RAD23BP54727 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RAD23BP54727 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.05■□□□□ 0.8
RAD23BP54727 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAD23BP54727 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.05■□□□□ 0.8
RAD23BP54727 AC012306.2-201ENST00000609350 630 ntBASIC20.05■□□□□ 0.8
RAD23BP54727 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RAD23BP54727 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RAD23BP54727 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAD23BP54727 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RAD23BP54727 RCC2P3-201ENST00000418112 1537 ntBASIC20.05■□□□□ 0.8
RAD23BP54727 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RAD23BP54727 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAD23BP54727 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.05■□□□□ 0.8
RAD23BP54727 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.05■□□□□ 0.8
RAD23BP54727 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RAD23BP54727 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAD23BP54727 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAD23BP54727 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.04■□□□□ 0.8
RAD23BP54727 CROCCP3-202ENST00000420820 1947 ntBASIC20.04■□□□□ 0.8
RAD23BP54727 HEIH-201ENST00000623091 1652 ntBASIC20.04■□□□□ 0.8
RAD23BP54727 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
RAD23BP54727 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAD23BP54727 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAD23BP54727 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD23BP54727 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms