Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HMGA2P52926 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGA2P52926 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGA2P52926 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGA2P52926 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGA2P52926 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGA2P52926 AC098934.4-201ENST00000564127 592 ntBASIC17.17■□□□□ 0.34
HMGA2P52926 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
HMGA2P52926 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGA2P52926 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGA2P52926 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGA2P52926 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGA2P52926 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGA2P52926 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
HMGA2P52926 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
HMGA2P52926 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGA2P52926 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGA2P52926 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 PRSS44-201ENST00000515154 1146 ntBASIC17.16■□□□□ 0.34
HMGA2P52926 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.16■□□□□ 0.34
HMGA2P52926 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGA2P52926 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGA2P52926 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGA2P52926 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.16■□□□□ 0.34
HMGA2P52926 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGA2P52926 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGA2P52926 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
HMGA2P52926 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGA2P52926 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGA2P52926 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
HMGA2P52926 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HMGA2P52926 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.16■□□□□ 0.34
HMGA2P52926 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HMGA2P52926 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGA2P52926 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGA2P52926 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
HMGA2P52926 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HMGA2P52926 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGA2P52926 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGA2P52926 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HMGA2P52926 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGA2P52926 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HMGA2P52926 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 AC138028.4-201ENST00000564984 1845 ntBASIC17.15■□□□□ 0.34
HMGA2P52926 AC008556.1-201ENST00000610908 2040 ntBASIC17.15■□□□□ 0.34
HMGA2P52926 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
HMGA2P52926 AC069152.1-201ENST00000438030 544 ntBASIC17.15■□□□□ 0.34
HMGA2P52926 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HMGA2P52926 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGA2P52926 LTB4R2-202ENST00000528054 3092 ntBASIC17.15■□□□□ 0.34
HMGA2P52926 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HMGA2P52926 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGA2P52926 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HMGA2P52926 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
HMGA2P52926 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HMGA2P52926 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGA2P52926 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGA2P52926 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HMGA2P52926 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms