Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SSR1P43307 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.96■□□□□ 0.79
SSR1P43307 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.96■□□□□ 0.79
SSR1P43307 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.96■□□□□ 0.79
SSR1P43307 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.96■□□□□ 0.79
SSR1P43307 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SSR1P43307 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR1P43307 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.96■□□□□ 0.79
SSR1P43307 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SSR1P43307 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR1P43307 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.95■□□□□ 0.78
SSR1P43307 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SSR1P43307 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
SSR1P43307 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR1P43307 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR1P43307 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR1P43307 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR1P43307 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SSR1P43307 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 TSPY23P-201ENST00000440136 739 ntBASIC19.95■□□□□ 0.78
SSR1P43307 AP002982.1-201ENST00000492365 877 ntBASIC19.95■□□□□ 0.78
SSR1P43307 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.95■□□□□ 0.78
SSR1P43307 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.95■□□□□ 0.78
SSR1P43307 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.95■□□□□ 0.78
SSR1P43307 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
SSR1P43307 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SSR1P43307 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.95■□□□□ 0.78
SSR1P43307 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR1P43307 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SSR1P43307 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SSR1P43307 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.94■□□□□ 0.78
SSR1P43307 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.94■□□□□ 0.78
SSR1P43307 FAM201B-201ENST00000458407 597 ntBASIC19.94■□□□□ 0.78
SSR1P43307 AC133681.1-201ENST00000465482 601 ntBASIC19.94■□□□□ 0.78
SSR1P43307 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SSR1P43307 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.94■□□□□ 0.78
SSR1P43307 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.94■□□□□ 0.78
SSR1P43307 AL138781.2-201ENST00000617896 1843 ntBASIC19.94■□□□□ 0.78
SSR1P43307 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.94■□□□□ 0.78
SSR1P43307 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 HTR7P1-201ENST00000538670 1336 ntBASIC19.94■□□□□ 0.78
SSR1P43307 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSR1P43307 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.94■□□□□ 0.78
SSR1P43307 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SSR1P43307 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.94■□□□□ 0.78
SSR1P43307 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SSR1P43307 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.93■□□□□ 0.78
SSR1P43307 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.93■□□□□ 0.78
SSR1P43307 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.93■□□□□ 0.78
SSR1P43307 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSR1P43307 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms