Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT20P35900 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.87■□□□□ 0.45
KRT20P35900 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.87■□□□□ 0.45
KRT20P35900 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.87■□□□□ 0.45
KRT20P35900 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT20P35900 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.87■□□□□ 0.45
KRT20P35900 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.87■□□□□ 0.45
KRT20P35900 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT20P35900 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT20P35900 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
KRT20P35900 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KRT20P35900 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT20P35900 AC135050.7-201ENST00000624508 2218 ntBASIC17.86■□□□□ 0.45
KRT20P35900 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT20P35900 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KRT20P35900 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 KSR1P1-201ENST00000446298 240 ntBASIC17.86■□□□□ 0.45
KRT20P35900 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT20P35900 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT20P35900 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.86■□□□□ 0.45
KRT20P35900 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.86■□□□□ 0.45
KRT20P35900 AF186192.3-201ENST00000583427 947 ntBASIC17.86■□□□□ 0.45
KRT20P35900 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT20P35900 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT20P35900 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 AL353708.3-201ENST00000610272 989 ntBASIC17.86■□□□□ 0.45
KRT20P35900 AC131212.4-201ENST00000623606 975 ntBASIC17.86■□□□□ 0.45
KRT20P35900 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
KRT20P35900 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT20P35900 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT20P35900 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT20P35900 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT20P35900 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT20P35900 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT20P35900 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT20P35900 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT20P35900 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT20P35900 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.85■□□□□ 0.45
KRT20P35900 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT20P35900 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.85■□□□□ 0.45
KRT20P35900 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT20P35900 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT20P35900 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT20P35900 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
KRT20P35900 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT20P35900 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT20P35900 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
KRT20P35900 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
KRT20P35900 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
KRT20P35900 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
KRT20P35900 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.85■□□□□ 0.45
KRT20P35900 AC073195.1-201ENST00000607241 877 ntBASIC17.85■□□□□ 0.45
KRT20P35900 AC006333.2-201ENST00000607957 2099 ntBASIC17.85■□□□□ 0.45
KRT20P35900 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT20P35900 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.85■□□□□ 0.45
KRT20P35900 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT20P35900 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT20P35900 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT20P35900 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
KRT20P35900 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.84■□□□□ 0.45
KRT20P35900 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms