Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.77■□□□□ 0.76
MMP8P22894 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.77■□□□□ 0.76
MMP8P22894 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.77■□□□□ 0.76
MMP8P22894 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.77■□□□□ 0.76
MMP8P22894 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MMP8P22894 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.77■□□□□ 0.75
MMP8P22894 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.77■□□□□ 0.75
MMP8P22894 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
MMP8P22894 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP8P22894 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.76■□□□□ 0.75
MMP8P22894 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 SLC25A1P2-201ENST00000430693 912 ntBASIC19.76■□□□□ 0.75
MMP8P22894 AC126763.1-201ENST00000552015 2118 ntBASIC19.76■□□□□ 0.75
MMP8P22894 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP8P22894 AC073592.3-201ENST00000625118 1834 ntBASIC19.76■□□□□ 0.75
MMP8P22894 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.76■□□□□ 0.75
MMP8P22894 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP8P22894 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
MMP8P22894 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.75■□□□□ 0.75
MMP8P22894 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.75■□□□□ 0.75
MMP8P22894 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
MMP8P22894 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP8P22894 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MMP8P22894 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MMP8P22894 AL390955.1-201ENST00000428694 934 ntBASIC19.75■□□□□ 0.75
MMP8P22894 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP8P22894 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP8P22894 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP8P22894 MIR4674-201ENST00000582457 87 ntBASIC19.75■□□□□ 0.75
MMP8P22894 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
MMP8P22894 KRT8P45-201ENST00000414328 1447 ntBASIC19.75■□□□□ 0.75
MMP8P22894 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.75■□□□□ 0.75
MMP8P22894 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MMP8P22894 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 NEFHP1-201ENST00000412845 2629 ntBASIC19.74■□□□□ 0.75
MMP8P22894 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP8P22894 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MMP8P22894 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MMP8P22894 MIR1238-201ENST00000408483 83 ntBASIC19.74■□□□□ 0.75
MMP8P22894 MCCD1P1-208ENST00000445732 328 ntBASIC19.74■□□□□ 0.75
MMP8P22894 TSPY15P-201ENST00000457163 923 ntBASIC19.74■□□□□ 0.75
MMP8P22894 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP8P22894 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.74■□□□□ 0.75
MMP8P22894 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.74■□□□□ 0.75
MMP8P22894 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP8P22894 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP8P22894 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.74■□□□□ 0.75
MMP8P22894 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
MMP8P22894 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP8P22894 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP8P22894 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.74■□□□□ 0.75
MMP8P22894 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
MMP8P22894 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.73■□□□□ 0.75
MMP8P22894 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms