Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 MIPEPP3-201ENST00000412105 444 ntBASIC17.76■□□□□ 0.43
NCK1P16333 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.76■□□□□ 0.43
NCK1P16333 AC026271.2-201ENST00000428091 497 ntBASIC17.76■□□□□ 0.43
NCK1P16333 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.76■□□□□ 0.43
NCK1P16333 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.76■□□□□ 0.43
NCK1P16333 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.76■□□□□ 0.43
NCK1P16333 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.76■□□□□ 0.43
NCK1P16333 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.76■□□□□ 0.43
NCK1P16333 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.76■□□□□ 0.43
NCK1P16333 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NCK1P16333 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCK1P16333 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NCK1P16333 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.75■□□□□ 0.43
NCK1P16333 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NCK1P16333 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.75■□□□□ 0.43
NCK1P16333 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NCK1P16333 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.75■□□□□ 0.43
NCK1P16333 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NCK1P16333 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NCK1P16333 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.75■□□□□ 0.43
NCK1P16333 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.75■□□□□ 0.43
NCK1P16333 TSPY23P-201ENST00000440136 739 ntBASIC17.75■□□□□ 0.43
NCK1P16333 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.75■□□□□ 0.43
NCK1P16333 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NCK1P16333 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 AC073111.5-205ENST00000641717 521 ntBASIC17.75■□□□□ 0.43
NCK1P16333 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 ESPNP-201ENST00000270691 2015 ntBASIC17.75■□□□□ 0.43
NCK1P16333 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NCK1P16333 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.75■□□□□ 0.43
NCK1P16333 AC092368.3-202ENST00000574180 1591 ntBASIC17.74■□□□□ 0.43
NCK1P16333 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.74■□□□□ 0.43
NCK1P16333 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NCK1P16333 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.74■□□□□ 0.43
NCK1P16333 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NCK1P16333 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.74■□□□□ 0.43
NCK1P16333 MIR663A-201ENST00000385250 93 ntBASIC17.74■□□□□ 0.43
NCK1P16333 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.74■□□□□ 0.43
NCK1P16333 TSPY21P-201ENST00000433481 731 ntBASIC17.74■□□□□ 0.43
NCK1P16333 AL162430.1-201ENST00000480705 870 ntBASIC17.74■□□□□ 0.43
NCK1P16333 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.74■□□□□ 0.43
NCK1P16333 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.74■□□□□ 0.43
NCK1P16333 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NCK1P16333 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.74■□□□□ 0.43
NCK1P16333 AC080038.1-201ENST00000611274 1154 ntBASIC17.74■□□□□ 0.43
NCK1P16333 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.74■□□□□ 0.43
NCK1P16333 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.74■□□□□ 0.43
NCK1P16333 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.74■□□□□ 0.43
NCK1P16333 AC135776.1-201ENST00000319817 2481 ntBASIC17.74■□□□□ 0.43
NCK1P16333 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NCK1P16333 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCK1P16333 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCK1P16333 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms