Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN1P07384 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CAPN1P07384 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN1P07384 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CAPN1P07384 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 RCN1P1-201ENST00000400413 996 ntBASIC18.49■□□□□ 0.55
CAPN1P07384 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.49■□□□□ 0.55
CAPN1P07384 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.49■□□□□ 0.55
CAPN1P07384 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN1P07384 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.49■□□□□ 0.55
CAPN1P07384 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN1P07384 AL160286.2-201ENST00000567150 934 ntBASIC18.49■□□□□ 0.55
CAPN1P07384 AL445675.2-201ENST00000620291 557 ntBASIC18.49■□□□□ 0.55
CAPN1P07384 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN1P07384 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN1P07384 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CAPN1P07384 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN1P07384 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CAPN1P07384 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CAPN1P07384 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 AC093525.10-201ENST00000625130 1569 ntBASIC18.48■□□□□ 0.55
CAPN1P07384 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.48■□□□□ 0.55
CAPN1P07384 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN1P07384 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.48■□□□□ 0.55
CAPN1P07384 MESTP1-201ENST00000404287 994 ntBASIC18.48■□□□□ 0.55
CAPN1P07384 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.48■□□□□ 0.55
CAPN1P07384 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.48■□□□□ 0.55
CAPN1P07384 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CAPN1P07384 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.48■□□□□ 0.55
CAPN1P07384 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN1P07384 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN1P07384 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.48■□□□□ 0.55
CAPN1P07384 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.48■□□□□ 0.55
CAPN1P07384 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.48■□□□□ 0.55
CAPN1P07384 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.48■□□□□ 0.55
CAPN1P07384 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN1P07384 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CAPN1P07384 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CAPN1P07384 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.48■□□□□ 0.55
CAPN1P07384 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.48■□□□□ 0.55
CAPN1P07384 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN1P07384 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CAPN1P07384 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CAPN1P07384 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.47■□□□□ 0.55
CAPN1P07384 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.47■□□□□ 0.55
CAPN1P07384 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.47■□□□□ 0.55
CAPN1P07384 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.47■□□□□ 0.55
CAPN1P07384 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.47■□□□□ 0.55
CAPN1P07384 AL512353.2-201ENST00000448759 1962 ntBASIC18.47■□□□□ 0.55
CAPN1P07384 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 Z98044.1-201ENST00000632503 1764 ntBASIC18.47■□□□□ 0.55
CAPN1P07384 AC104581.1-202ENST00000635932 2618 ntBASIC18.47■□□□□ 0.55
CAPN1P07384 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN1P07384 AC026471.1-201ENST00000564629 3026 ntBASIC18.47■□□□□ 0.55
CAPN1P07384 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CAPN1P07384 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CAPN1P07384 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN1P07384 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms