Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.32□□□□□ -0.12
TCRAP04437 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.32□□□□□ -0.12
TCRAP04437 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRAP04437 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.32□□□□□ -0.12
TCRAP04437 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRAP04437 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRAP04437 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRAP04437 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TCRAP04437 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.31□□□□□ -0.12
TCRAP04437 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.31□□□□□ -0.12
TCRAP04437 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.31□□□□□ -0.12
TCRAP04437 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TCRAP04437 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TCRAP04437 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.31□□□□□ -0.12
TCRAP04437 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.31□□□□□ -0.12
TCRAP04437 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.31□□□□□ -0.12
TCRAP04437 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.31□□□□□ -0.12
TCRAP04437 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.31□□□□□ -0.12
TCRAP04437 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.31□□□□□ -0.12
TCRAP04437 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.31□□□□□ -0.12
TCRAP04437 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.31□□□□□ -0.12
TCRAP04437 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TCRAP04437 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TCRAP04437 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.31□□□□□ -0.12
TCRAP04437 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TCRAP04437 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TCRAP04437 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRAP04437 ESPNP-201ENST00000270691 2015 ntBASIC14.31□□□□□ -0.12
TCRAP04437 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
TCRAP04437 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TCRAP04437 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRAP04437 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 HEIH-201ENST00000623091 1652 ntBASIC14.3□□□□□ -0.12
TCRAP04437 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TCRAP04437 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRAP04437 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TCRAP04437 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TCRAP04437 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TCRAP04437 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.3□□□□□ -0.12
TCRAP04437 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.3□□□□□ -0.12
TCRAP04437 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRAP04437 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRAP04437 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TCRAP04437 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TCRAP04437 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TCRAP04437 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TCRAP04437 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TCRAP04437 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRAP04437 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TCRAP04437 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
TCRAP04437 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRAP04437 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TCRAP04437 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TCRAP04437 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TCRAP04437 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.29□□□□□ -0.12
TCRAP04437 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRAP04437 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TCRAP04437 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TCRAP04437 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms