Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.61■□□□□ 0.25
APOC1P02654 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
APOC1P02654 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.61■□□□□ 0.25
APOC1P02654 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APOC1P02654 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
APOC1P02654 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.61■□□□□ 0.25
APOC1P02654 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.61■□□□□ 0.25
APOC1P02654 AC124016.1-201ENST00000609552 612 ntBASIC16.61■□□□□ 0.25
APOC1P02654 AL445675.2-201ENST00000620291 557 ntBASIC16.61■□□□□ 0.25
APOC1P02654 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.61■□□□□ 0.25
APOC1P02654 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.61■□□□□ 0.25
APOC1P02654 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.61■□□□□ 0.25
APOC1P02654 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.61■□□□□ 0.25
APOC1P02654 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.61■□□□□ 0.25
APOC1P02654 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
APOC1P02654 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
APOC1P02654 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APOC1P02654 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOC1P02654 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
APOC1P02654 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOC1P02654 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.61■□□□□ 0.25
APOC1P02654 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
APOC1P02654 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
APOC1P02654 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.61■□□□□ 0.25
APOC1P02654 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
APOC1P02654 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
APOC1P02654 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
APOC1P02654 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.6■□□□□ 0.25
APOC1P02654 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
APOC1P02654 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
APOC1P02654 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.6■□□□□ 0.25
APOC1P02654 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.6■□□□□ 0.25
APOC1P02654 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
APOC1P02654 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.6■□□□□ 0.25
APOC1P02654 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.6■□□□□ 0.25
APOC1P02654 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APOC1P02654 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.6■□□□□ 0.25
APOC1P02654 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
APOC1P02654 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.59■□□□□ 0.25
APOC1P02654 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.59■□□□□ 0.25
APOC1P02654 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.59■□□□□ 0.25
APOC1P02654 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.59■□□□□ 0.25
APOC1P02654 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.59■□□□□ 0.25
APOC1P02654 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
APOC1P02654 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.59■□□□□ 0.25
APOC1P02654 AP002982.1-201ENST00000492365 877 ntBASIC16.59■□□□□ 0.25
APOC1P02654 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
APOC1P02654 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.59■□□□□ 0.25
APOC1P02654 AC233263.1-201ENST00000578059 224 ntBASIC16.59■□□□□ 0.25
APOC1P02654 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.59■□□□□ 0.25
APOC1P02654 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.59■□□□□ 0.25
APOC1P02654 AC006058.3-201ENST00000606217 1069 ntBASIC16.59■□□□□ 0.25
APOC1P02654 AL353708.3-201ENST00000610272 989 ntBASIC16.59■□□□□ 0.25
APOC1P02654 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.59■□□□□ 0.25
APOC1P02654 AC083906.6-201ENST00000641366 219 ntBASIC16.59■□□□□ 0.25
APOC1P02654 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.59■□□□□ 0.25
APOC1P02654 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.59■□□□□ 0.25
APOC1P02654 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.59■□□□□ 0.25
APOC1P02654 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APOC1P02654 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.59■□□□□ 0.25
APOC1P02654 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms