Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLPTM1O96005 ID1-201ENST00000376105 1233 ntBASIC17.73■□□□□ 0.43
CLPTM1O96005 GPX1P1-201ENST00000388829 606 ntBASIC17.73■□□□□ 0.43
CLPTM1O96005 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.73■□□□□ 0.43
CLPTM1O96005 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.73■□□□□ 0.43
CLPTM1O96005 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.73■□□□□ 0.43
CLPTM1O96005 AL121832.2-201ENST00000610979 668 ntBASIC17.73■□□□□ 0.43
CLPTM1O96005 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.73■□□□□ 0.43
CLPTM1O96005 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.73■□□□□ 0.43
CLPTM1O96005 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 AL162741.1-201ENST00000565563 1558 ntBASIC17.73■□□□□ 0.43
CLPTM1O96005 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLPTM1O96005 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
CLPTM1O96005 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLPTM1O96005 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLPTM1O96005 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.72■□□□□ 0.43
CLPTM1O96005 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.72■□□□□ 0.43
CLPTM1O96005 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLPTM1O96005 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.72■□□□□ 0.43
CLPTM1O96005 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CLPTM1O96005 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLPTM1O96005 AF201337.1-201ENST00000520239 748 ntBASIC17.72■□□□□ 0.43
CLPTM1O96005 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 AC105036.2-201ENST00000569468 176 ntBASIC17.72■□□□□ 0.43
CLPTM1O96005 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 AC069236.1-201ENST00000604339 616 ntBASIC17.72■□□□□ 0.43
CLPTM1O96005 AC008694.1-202ENST00000636953 945 ntBASIC17.72■□□□□ 0.43
CLPTM1O96005 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLPTM1O96005 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 AC080080.1-201ENST00000625121 2420 ntBASIC17.72■□□□□ 0.43
CLPTM1O96005 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLPTM1O96005 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.72■□□□□ 0.43
CLPTM1O96005 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.71■□□□□ 0.43
CLPTM1O96005 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLPTM1O96005 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPTM1O96005 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPTM1O96005 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.71■□□□□ 0.43
CLPTM1O96005 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.71■□□□□ 0.43
CLPTM1O96005 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLPTM1O96005 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPTM1O96005 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLPTM1O96005 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLPTM1O96005 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPTM1O96005 AC093787.1-201ENST00000450396 207 ntBASIC17.71■□□□□ 0.43
CLPTM1O96005 CDV3P1-201ENST00000471403 739 ntBASIC17.71■□□□□ 0.43
CLPTM1O96005 AC133552.2-202ENST00000575694 574 ntBASIC17.71■□□□□ 0.43
CLPTM1O96005 AL109923.1-201ENST00000618799 583 ntBASIC17.71■□□□□ 0.43
CLPTM1O96005 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPTM1O96005 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CLPTM1O96005 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CLPTM1O96005 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPTM1O96005 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLPTM1O96005 KRT16P6-202ENST00000425692 1426 ntBASIC17.71■□□□□ 0.43
CLPTM1O96005 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLPTM1O96005 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLPTM1O96005 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLPTM1O96005 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CLPTM1O96005 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLPTM1O96005 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.7■□□□□ 0.42
CLPTM1O96005 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLPTM1O96005 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms