Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX3O95343 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX3O95343 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.39■□□□□ 0.53
SIX3O95343 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.39■□□□□ 0.53
SIX3O95343 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIX3O95343 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SIX3O95343 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX3O95343 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX3O95343 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 KSR1P1-201ENST00000446298 240 ntBASIC18.38■□□□□ 0.53
SIX3O95343 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SIX3O95343 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX3O95343 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX3O95343 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.38■□□□□ 0.53
SIX3O95343 AC068587.9-201ENST00000641814 219 ntBASIC18.38■□□□□ 0.53
SIX3O95343 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX3O95343 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.38■□□□□ 0.53
SIX3O95343 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX3O95343 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.38■□□□□ 0.53
SIX3O95343 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIX3O95343 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SIX3O95343 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX3O95343 AL354751.1-201ENST00000412768 1863 ntBASIC18.37■□□□□ 0.53
SIX3O95343 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.37■□□□□ 0.53
SIX3O95343 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.37■□□□□ 0.53
SIX3O95343 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SIX3O95343 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 AC008040.2-201ENST00000461049 708 ntBASIC18.37■□□□□ 0.53
SIX3O95343 PRSS44-201ENST00000515154 1146 ntBASIC18.37■□□□□ 0.53
SIX3O95343 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.37■□□□□ 0.53
SIX3O95343 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.37■□□□□ 0.53
SIX3O95343 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.37■□□□□ 0.53
SIX3O95343 CR392000.1-201ENST00000624770 1228 ntBASIC18.37■□□□□ 0.53
SIX3O95343 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SIX3O95343 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.37■□□□□ 0.53
SIX3O95343 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.37■□□□□ 0.53
SIX3O95343 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIX3O95343 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.36■□□□□ 0.53
SIX3O95343 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SIX3O95343 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.36■□□□□ 0.53
SIX3O95343 KRT16P1-201ENST00000399124 1418 ntBASIC18.36■□□□□ 0.53
SIX3O95343 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.36■□□□□ 0.53
SIX3O95343 AC004951.3-201ENST00000418645 1148 ntBASIC18.36■□□□□ 0.53
SIX3O95343 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.36■□□□□ 0.53
SIX3O95343 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.36■□□□□ 0.53
SIX3O95343 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.36■□□□□ 0.53
SIX3O95343 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.36■□□□□ 0.53
SIX3O95343 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIX3O95343 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX3O95343 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SIX3O95343 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX3O95343 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX3O95343 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX3O95343 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX3O95343 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX3O95343 KRT8P32-201ENST00000512863 1461 ntBASIC18.35■□□□□ 0.53
SIX3O95343 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
SIX3O95343 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX3O95343 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX3O95343 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX3O95343 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.35■□□□□ 0.53
SIX3O95343 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX3O95343 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIX3O95343 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIX3O95343 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.35■□□□□ 0.53
SIX3O95343 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms