Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.9■□□□□ 0.62
VAPBO95292 B3GAT3P1-201ENST00000471720 806 ntBASIC18.9■□□□□ 0.62
VAPBO95292 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.9■□□□□ 0.62
VAPBO95292 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.9■□□□□ 0.62
VAPBO95292 CD177P1-201ENST00000606252 935 ntBASIC18.9■□□□□ 0.62
VAPBO95292 MIR6786-201ENST00000616843 113 ntBASIC18.9■□□□□ 0.62
VAPBO95292 AC007613.1-201ENST00000572811 2597 ntBASIC18.9■□□□□ 0.62
VAPBO95292 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.9■□□□□ 0.62
VAPBO95292 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VAPBO95292 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VAPBO95292 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VAPBO95292 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VAPBO95292 HEIH-201ENST00000623091 1652 ntBASIC18.89■□□□□ 0.61
VAPBO95292 AC138932.1-201ENST00000534164 6830 ntBASIC18.89■□□□□ 0.61
VAPBO95292 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VAPBO95292 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VAPBO95292 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VAPBO95292 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VAPBO95292 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.89■□□□□ 0.61
VAPBO95292 GCSHP5-201ENST00000443090 522 ntBASIC18.89■□□□□ 0.61
VAPBO95292 FAM207BP-201ENST00000447172 505 ntBASIC18.89■□□□□ 0.61
VAPBO95292 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
VAPBO95292 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VAPBO95292 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.89■□□□□ 0.61
VAPBO95292 CKBP1-201ENST00000565489 1086 ntBASIC18.89■□□□□ 0.61
VAPBO95292 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.89■□□□□ 0.61
VAPBO95292 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VAPBO95292 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.89■□□□□ 0.61
VAPBO95292 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VAPBO95292 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
VAPBO95292 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VAPBO95292 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VAPBO95292 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VAPBO95292 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VAPBO95292 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VAPBO95292 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.88■□□□□ 0.61
VAPBO95292 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.88■□□□□ 0.61
VAPBO95292 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 AC090164.3-201ENST00000610780 2143 ntBASIC18.88■□□□□ 0.61
VAPBO95292 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.88■□□□□ 0.61
VAPBO95292 UBE2SP1-201ENST00000450587 669 ntBASIC18.88■□□□□ 0.61
VAPBO95292 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
VAPBO95292 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.88■□□□□ 0.61
VAPBO95292 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.88■□□□□ 0.61
VAPBO95292 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
VAPBO95292 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.88■□□□□ 0.61
VAPBO95292 KRT8P3-201ENST00000519669 1449 ntBASIC18.88■□□□□ 0.61
VAPBO95292 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.88■□□□□ 0.61
VAPBO95292 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VAPBO95292 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.88■□□□□ 0.61
VAPBO95292 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
VAPBO95292 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.88■□□□□ 0.61
VAPBO95292 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.88■□□□□ 0.61
VAPBO95292 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
VAPBO95292 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.87■□□□□ 0.61
VAPBO95292 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VAPBO95292 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
VAPBO95292 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 MESTP1-201ENST00000404287 994 ntBASIC18.87■□□□□ 0.61
VAPBO95292 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.87■□□□□ 0.61
VAPBO95292 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.87■□□□□ 0.61
VAPBO95292 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.87■□□□□ 0.61
VAPBO95292 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.87■□□□□ 0.61
VAPBO95292 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.87■□□□□ 0.61
VAPBO95292 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VAPBO95292 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.87■□□□□ 0.61
VAPBO95292 FSCN1P1-201ENST00000568912 1481 ntBASIC18.87■□□□□ 0.61
VAPBO95292 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
VAPBO95292 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.87■□□□□ 0.61
VAPBO95292 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPBO95292 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.87■□□□□ 0.61
VAPBO95292 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPBO95292 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VAPBO95292 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VAPBO95292 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms