Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 AC010947.1-201ENST00000623454 693 ntBASIC17.52■□□□□ 0.4
TRIM3O75382 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM3O75382 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM3O75382 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM3O75382 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM3O75382 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM3O75382 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM3O75382 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM3O75382 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM3O75382 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRIM3O75382 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM3O75382 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM3O75382 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM3O75382 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM3O75382 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 AC145285.6-201ENST00000604632 637 ntBASIC17.51■□□□□ 0.39
TRIM3O75382 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM3O75382 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM3O75382 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM3O75382 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM3O75382 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM3O75382 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM3O75382 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM3O75382 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRIM3O75382 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM3O75382 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM3O75382 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM3O75382 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM3O75382 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM3O75382 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM3O75382 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM3O75382 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.5■□□□□ 0.39
TRIM3O75382 MFAP1P1-201ENST00000442257 1255 ntBASIC17.5■□□□□ 0.39
TRIM3O75382 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM3O75382 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM3O75382 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM3O75382 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRIM3O75382 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 AL049812.1-201ENST00000432563 2267 ntBASIC17.5■□□□□ 0.39
TRIM3O75382 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM3O75382 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM3O75382 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM3O75382 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM3O75382 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
TRIM3O75382 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM3O75382 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRIM3O75382 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM3O75382 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRIM3O75382 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM3O75382 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM3O75382 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM3O75382 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM3O75382 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TRIM3O75382 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM3O75382 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM3O75382 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM3O75382 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM3O75382 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms