Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.87□□□□□ -0.35
NDUFA1O15239 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
NDUFA1O15239 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.87□□□□□ -0.35
NDUFA1O15239 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.87□□□□□ -0.35
NDUFA1O15239 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.87□□□□□ -0.35
NDUFA1O15239 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.87□□□□□ -0.35
NDUFA1O15239 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 RAP2CP1-201ENST00000605103 478 ntBASIC12.87□□□□□ -0.35
NDUFA1O15239 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.87□□□□□ -0.35
NDUFA1O15239 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
NDUFA1O15239 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.87□□□□□ -0.35
NDUFA1O15239 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.87□□□□□ -0.35
NDUFA1O15239 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
NDUFA1O15239 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.87□□□□□ -0.35
NDUFA1O15239 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
NDUFA1O15239 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
NDUFA1O15239 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
NDUFA1O15239 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFA1O15239 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFA1O15239 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 AC073210.2-201ENST00000430369 194 ntBASIC12.86□□□□□ -0.35
NDUFA1O15239 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFA1O15239 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFA1O15239 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
NDUFA1O15239 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.86□□□□□ -0.35
NDUFA1O15239 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.86□□□□□ -0.35
NDUFA1O15239 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
NDUFA1O15239 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFA1O15239 AC073111.5-205ENST00000641717 521 ntBASIC12.86□□□□□ -0.35
NDUFA1O15239 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
NDUFA1O15239 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 ESPNP-201ENST00000270691 2015 ntBASIC12.86□□□□□ -0.35
NDUFA1O15239 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
NDUFA1O15239 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.86□□□□□ -0.35
NDUFA1O15239 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NDUFA1O15239 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFA1O15239 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NDUFA1O15239 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.86□□□□□ -0.35
NDUFA1O15239 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFA1O15239 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 GNAS-203ENST00000306120 1878 ntBASIC12.85□□□□□ -0.35
NDUFA1O15239 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NDUFA1O15239 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFA1O15239 MIR663A-201ENST00000385250 93 ntBASIC12.85□□□□□ -0.35
NDUFA1O15239 AC026185.1-201ENST00000445748 174 ntBASIC12.85□□□□□ -0.35
NDUFA1O15239 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.85□□□□□ -0.35
NDUFA1O15239 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.85□□□□□ -0.35
NDUFA1O15239 AC005829.2-201ENST00000571422 1056 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms