Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 RCC2P6-201ENST00000526625 1557 ntBASIC16.39■□□□□ 0.21
SHISA3A0PJX4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 REXO1L9P-201ENST00000604264 2108 ntBASIC16.39■□□□□ 0.21
SHISA3A0PJX4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 TUBB8P6-201ENST00000436895 1288 ntBASIC16.39■□□□□ 0.21
SHISA3A0PJX4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.39■□□□□ 0.21
SHISA3A0PJX4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.39■□□□□ 0.21
SHISA3A0PJX4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 KRT18P5-201ENST00000436075 1291 ntBASIC16.38■□□□□ 0.21
SHISA3A0PJX4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 AL121906.2-201ENST00000621597 723 ntBASIC16.38■□□□□ 0.21
SHISA3A0PJX4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 AC068587.9-201ENST00000641814 219 ntBASIC16.38■□□□□ 0.21
SHISA3A0PJX4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.38■□□□□ 0.21
SHISA3A0PJX4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SHISA3A0PJX4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 AC084018.2-201ENST00000613093 2607 ntBASIC16.36■□□□□ 0.21
SHISA3A0PJX4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.36■□□□□ 0.21
SHISA3A0PJX4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms