Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 MCCD1P1-208ENST00000445732 328 ntBASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.62■□□□□ 0.73
TCRBV5S1A1TA0A578 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 AC112777.1-201ENST00000540175 1423 ntBASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 MIR1238-201ENST00000408483 83 ntBASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 AC135050.7-201ENST00000624508 2218 ntBASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TCRBV5S1A1TA0A578 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 AL596275.1-201ENST00000423464 877 ntBASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 AP003041.3-201ENST00000527151 707 ntBASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TCRBV5S1A1TA0A578 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 AC066615.1-201ENST00000640911 628 ntBASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 CYP2D8P-201ENST00000433633 1490 ntBASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.59■□□□□ 0.73
TCRBV5S1A1TA0A578 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TCRBV5S1A1TA0A578 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.58■□□□□ 0.73
TCRBV5S1A1TA0A578 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TCRBV5S1A1TA0A578 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 INGX-201ENST00000359239 846 ntBASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 AC007663.1-201ENST00000438948 1240 ntBASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 TSPY17P-201ENST00000450329 467 ntBASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 MIR3180-5-201ENST00000583743 153 ntBASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TCRBV5S1A1TA0A578 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 TSPY14P-201ENST00000303979 915 ntBASIC19.57■□□□□ 0.72
TCRBV5S1A1TA0A578 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms