Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 AC133561.5-201ENST00000635547 218 ntBASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCA3PQ9Y6N3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 AC005332.7-201ENST00000614046 2005 ntBASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 KRT8P9-201ENST00000558927 1449 ntBASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCA3PQ9Y6N3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 CYP2D8P-201ENST00000433633 1490 ntBASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 AC211429.1-201ENST00000415277 523 ntBASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 CCR12P-201ENST00000446203 998 ntBASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.77■□□□□ 0.44
CLCA3PQ9Y6N3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCA3PQ9Y6N3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.77■□□□□ 0.43
CLCA3PQ9Y6N3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
CLCA3PQ9Y6N3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.77■□□□□ 0.43
CLCA3PQ9Y6N3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCA3PQ9Y6N3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLCA3PQ9Y6N3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 BCL2-203ENST00000589955 5011 ntBASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 SLC25A1P2-201ENST00000430693 912 ntBASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 CA15P1-201ENST00000481698 905 ntBASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 AC128688.1-201ENST00000487626 519 ntBASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCA3PQ9Y6N3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms