Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 AC022188.1-201ENST00000620960 1664 ntBASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 R3HDM2P2-201ENST00000401880 2116 ntBASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 AC105917.1-201ENST00000506637 2539 ntBASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 CICP4-201ENST00000447359 2812 ntBASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC9.66□□□□□ -0.86
CDC42SE1Q9NRR8 GOLGA8DP-202ENST00000341390 2184 ntBASIC9.65□□□□□ -0.86
CDC42SE1Q9NRR8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms