Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 AL023284.2-201ENST00000405850 579 ntBASIC19.46■□□□□ 0.71
HPS4Q9NQG7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 RASA4DP-201ENST00000460726 1199 ntBASIC19.46■□□□□ 0.71
HPS4Q9NQG7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 AC092597.1-201ENST00000487352 616 ntBASIC19.46■□□□□ 0.71
HPS4Q9NQG7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 CLEC4GP1-201ENST00000596555 870 ntBASIC19.46■□□□□ 0.71
HPS4Q9NQG7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.46■□□□□ 0.71
HPS4Q9NQG7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 AC036111.1-201ENST00000533973 1582 ntBASIC19.45■□□□□ 0.7
HPS4Q9NQG7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.45■□□□□ 0.7
HPS4Q9NQG7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS4Q9NQG7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.44■□□□□ 0.7
HPS4Q9NQG7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS4Q9NQG7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 AC024243.1-201ENST00000609234 778 ntBASIC19.43■□□□□ 0.7
HPS4Q9NQG7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HPS4Q9NQG7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 AL450487.1-201ENST00000426799 995 ntBASIC19.42■□□□□ 0.7
HPS4Q9NQG7 ATP5G2P1-201ENST00000433580 426 ntBASIC19.42■□□□□ 0.7
HPS4Q9NQG7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms