Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 AC233263.1-201ENST00000578059 224 ntBASIC17.01■□□□□ 0.31
HINT3Q9NQE9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 RN7SL471P-201ENST00000580476 299 ntBASIC17.01■□□□□ 0.31
HINT3Q9NQE9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17■□□□□ 0.31
HINT3Q9NQE9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 ABALON-201ENST00000629058 1903 ntBASIC17■□□□□ 0.31
HINT3Q9NQE9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HINT3Q9NQE9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HINT3Q9NQE9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HINT3Q9NQE9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 AL158047.1-201ENST00000445918 881 ntBASIC17■□□□□ 0.31
HINT3Q9NQE9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17■□□□□ 0.31
HINT3Q9NQE9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17■□□□□ 0.31
HINT3Q9NQE9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17■□□□□ 0.31
HINT3Q9NQE9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HINT3Q9NQE9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 AC142381.4-202ENST00000563973 229 ntBASIC17■□□□□ 0.31
HINT3Q9NQE9 AL160286.2-201ENST00000567150 934 ntBASIC17■□□□□ 0.31
HINT3Q9NQE9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
HINT3Q9NQE9 HLA-A-209ENST00000638375 975 ntBASIC17■□□□□ 0.31
HINT3Q9NQE9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17■□□□□ 0.31
HINT3Q9NQE9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HINT3Q9NQE9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 GCSHP5-201ENST00000443090 522 ntBASIC16.99■□□□□ 0.31
HINT3Q9NQE9 AC098590.1-201ENST00000468126 897 ntBASIC16.99■□□□□ 0.31
HINT3Q9NQE9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 C1QBPP2-201ENST00000528754 825 ntBASIC16.99■□□□□ 0.31
HINT3Q9NQE9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HINT3Q9NQE9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.98■□□□□ 0.31
HINT3Q9NQE9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms