Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.02■□□□□ 0.96
CBX8Q9HC52 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBX8Q9HC52 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CBX8Q9HC52 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBX8Q9HC52 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.02■□□□□ 0.96
CBX8Q9HC52 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.02■□□□□ 0.96
CBX8Q9HC52 AC091874.3-201ENST00000512672 1195 ntBASIC21.02■□□□□ 0.96
CBX8Q9HC52 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.02■□□□□ 0.96
CBX8Q9HC52 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.02■□□□□ 0.96
CBX8Q9HC52 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBX8Q9HC52 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBX8Q9HC52 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBX8Q9HC52 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBX8Q9HC52 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBX8Q9HC52 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.02■□□□□ 0.96
CBX8Q9HC52 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
CBX8Q9HC52 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CBX8Q9HC52 AC092368.3-202ENST00000574180 1591 ntBASIC21.02■□□□□ 0.95
CBX8Q9HC52 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 AC120498.8-201ENST00000614275 531 ntBASIC21.01■□□□□ 0.95
CBX8Q9HC52 AL121829.2-201ENST00000620908 328 ntBASIC21.01■□□□□ 0.95
CBX8Q9HC52 AC073111.5-205ENST00000641717 521 ntBASIC21.01■□□□□ 0.95
CBX8Q9HC52 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.01■□□□□ 0.95
CBX8Q9HC52 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX8Q9HC52 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21■□□□□ 0.95
CBX8Q9HC52 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CBX8Q9HC52 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21■□□□□ 0.95
CBX8Q9HC52 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CBX8Q9HC52 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21■□□□□ 0.95
CBX8Q9HC52 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21■□□□□ 0.95
CBX8Q9HC52 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CBX8Q9HC52 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CBX8Q9HC52 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CBX8Q9HC52 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21■□□□□ 0.95
CBX8Q9HC52 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21■□□□□ 0.95
CBX8Q9HC52 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21■□□□□ 0.95
CBX8Q9HC52 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21■□□□□ 0.95
CBX8Q9HC52 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21■□□□□ 0.95
CBX8Q9HC52 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21■□□□□ 0.95
CBX8Q9HC52 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21■□□□□ 0.95
CBX8Q9HC52 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CBX8Q9HC52 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.99■□□□□ 0.95
CBX8Q9HC52 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.99■□□□□ 0.95
CBX8Q9HC52 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.99■□□□□ 0.95
CBX8Q9HC52 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CBX8Q9HC52 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CBX8Q9HC52 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CBX8Q9HC52 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CBX8Q9HC52 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CBX8Q9HC52 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CBX8Q9HC52 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.99■□□□□ 0.95
CBX8Q9HC52 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.99■□□□□ 0.95
CBX8Q9HC52 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.99■□□□□ 0.95
CBX8Q9HC52 AL160286.2-201ENST00000567150 934 ntBASIC20.99■□□□□ 0.95
CBX8Q9HC52 AC080038.1-201ENST00000611274 1154 ntBASIC20.99■□□□□ 0.95
CBX8Q9HC52 AC068587.9-201ENST00000641814 219 ntBASIC20.99■□□□□ 0.95
CBX8Q9HC52 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
CBX8Q9HC52 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CBX8Q9HC52 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms