Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 AP003071.4-201ENST00000562276 1284 ntBASIC20.07■□□□□ 0.8
SYNCQ9H7C4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 MIR4785-201ENST00000585005 73 ntBASIC20.07■□□□□ 0.8
SYNCQ9H7C4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 TNXA-203ENST00000507684 2038 ntBASIC20.07■□□□□ 0.8
SYNCQ9H7C4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNCQ9H7C4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 MESTP1-201ENST00000404287 994 ntBASIC20.06■□□□□ 0.8
SYNCQ9H7C4 SNORA78-201ENST00000459373 127 ntBASIC20.06■□□□□ 0.8
SYNCQ9H7C4 AC116562.2-201ENST00000507042 360 ntBASIC20.06■□□□□ 0.8
SYNCQ9H7C4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 SLC25A1P4-201ENST00000567977 778 ntBASIC20.06■□□□□ 0.8
SYNCQ9H7C4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 REXO1L10P-201ENST00000615707 1290 ntBASIC20.06■□□□□ 0.8
SYNCQ9H7C4 REXO1L12P-201ENST00000622156 912 ntBASIC20.06■□□□□ 0.8
SYNCQ9H7C4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.06■□□□□ 0.8
SYNCQ9H7C4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 AP000692.2-201ENST00000608391 879 ntBASIC20.05■□□□□ 0.8
SYNCQ9H7C4 DGCR10-201ENST00000609839 495 ntBASIC20.05■□□□□ 0.8
SYNCQ9H7C4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYNCQ9H7C4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 CKBP1-201ENST00000565489 1086 ntBASIC20.04■□□□□ 0.8
SYNCQ9H7C4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 AC006333.2-201ENST00000607957 2099 ntBASIC20.04■□□□□ 0.8
SYNCQ9H7C4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.04■□□□□ 0.8
SYNCQ9H7C4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCQ9H7C4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCQ9H7C4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYNCQ9H7C4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms