Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 PNMA6B-201ENST00000538162 1200 ntBASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 AC060766.5-201ENST00000590539 871 ntBASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 AC120498.8-201ENST00000614275 531 ntBASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD4Q9H0A8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 MIR4758-201ENST00000577688 71 ntBASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 NOC2LP1-202ENST00000452600 2235 ntBASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD4Q9H0A8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 NCF1B-203ENST00000435988 1254 ntBASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 GUSBP6-202ENST00000438529 1198 ntBASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD4Q9H0A8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 AC005332.8-201ENST00000622750 2735 ntBASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD4Q9H0A8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms