Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.91■□□□□ 0.78
CALR3Q96L12 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.91■□□□□ 0.78
CALR3Q96L12 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.91■□□□□ 0.78
CALR3Q96L12 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.91■□□□□ 0.78
CALR3Q96L12 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.91■□□□□ 0.78
CALR3Q96L12 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.91■□□□□ 0.78
CALR3Q96L12 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CALR3Q96L12 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.91■□□□□ 0.78
CALR3Q96L12 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.91■□□□□ 0.78
CALR3Q96L12 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.91■□□□□ 0.78
CALR3Q96L12 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 KRT8P32-201ENST00000512863 1461 ntBASIC19.91■□□□□ 0.78
CALR3Q96L12 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.91■□□□□ 0.78
CALR3Q96L12 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 PCDHB18P-201ENST00000524813 2368 ntBASIC19.91■□□□□ 0.78
CALR3Q96L12 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CALR3Q96L12 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 AC068880.1-201ENST00000507289 2297 ntBASIC19.9■□□□□ 0.78
CALR3Q96L12 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CALR3Q96L12 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.9■□□□□ 0.78
CALR3Q96L12 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 AP003097.1-201ENST00000530657 1135 ntBASIC19.9■□□□□ 0.78
CALR3Q96L12 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.9■□□□□ 0.78
CALR3Q96L12 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 AC131212.4-201ENST00000623606 975 ntBASIC19.9■□□□□ 0.78
CALR3Q96L12 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.9■□□□□ 0.78
CALR3Q96L12 AC112777.1-201ENST00000540175 1423 ntBASIC19.9■□□□□ 0.78
CALR3Q96L12 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.9■□□□□ 0.78
CALR3Q96L12 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.9■□□□□ 0.78
CALR3Q96L12 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.9■□□□□ 0.78
CALR3Q96L12 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CALR3Q96L12 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.9■□□□□ 0.78
CALR3Q96L12 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CALR3Q96L12 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CALR3Q96L12 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CALR3Q96L12 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
CALR3Q96L12 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CALR3Q96L12 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALR3Q96L12 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.89■□□□□ 0.77
CALR3Q96L12 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CALR3Q96L12 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CALR3Q96L12 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.89■□□□□ 0.77
CALR3Q96L12 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.89■□□□□ 0.77
CALR3Q96L12 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CALR3Q96L12 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALR3Q96L12 MIR935-201ENST00000401179 91 ntBASIC19.89■□□□□ 0.77
CALR3Q96L12 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CALR3Q96L12 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.89■□□□□ 0.77
CALR3Q96L12 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.89■□□□□ 0.77
CALR3Q96L12 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALR3Q96L12 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CALR3Q96L12 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALR3Q96L12 AC069544.1-201ENST00000609399 999 ntBASIC19.89■□□□□ 0.77
CALR3Q96L12 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.89■□□□□ 0.77
CALR3Q96L12 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.89■□□□□ 0.77
CALR3Q96L12 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALR3Q96L12 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CALR3Q96L12 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CALR3Q96L12 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CALR3Q96L12 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CALR3Q96L12 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CALR3Q96L12 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.88■□□□□ 0.77
CALR3Q96L12 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.88■□□□□ 0.77
CALR3Q96L12 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CALR3Q96L12 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 AC026366.1-201ENST00000488803 879 ntBASIC19.88■□□□□ 0.77
CALR3Q96L12 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.88■□□□□ 0.77
CALR3Q96L12 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CALR3Q96L12 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CALR3Q96L12 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms