Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUSD3Q96L08 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SUSD3Q96L08 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.94■□□□□ 0.78
SUSD3Q96L08 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SUSD3Q96L08 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SUSD3Q96L08 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUSD3Q96L08 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.94■□□□□ 0.78
SUSD3Q96L08 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.94■□□□□ 0.78
SUSD3Q96L08 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUSD3Q96L08 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SUSD3Q96L08 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUSD3Q96L08 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUSD3Q96L08 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUSD3Q96L08 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUSD3Q96L08 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUSD3Q96L08 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 AC079602.3-201ENST00000623931 403 ntBASIC19.93■□□□□ 0.78
SUSD3Q96L08 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUSD3Q96L08 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 AC034236.2-201ENST00000606662 1610 ntBASIC19.93■□□□□ 0.78
SUSD3Q96L08 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SUSD3Q96L08 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.93■□□□□ 0.78
SUSD3Q96L08 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SUSD3Q96L08 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SUSD3Q96L08 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SUSD3Q96L08 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SUSD3Q96L08 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.92■□□□□ 0.78
SUSD3Q96L08 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.92■□□□□ 0.78
SUSD3Q96L08 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SUSD3Q96L08 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SUSD3Q96L08 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SUSD3Q96L08 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SUSD3Q96L08 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.92■□□□□ 0.78
SUSD3Q96L08 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SUSD3Q96L08 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SUSD3Q96L08 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.92■□□□□ 0.78
SUSD3Q96L08 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SUSD3Q96L08 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.92■□□□□ 0.78
SUSD3Q96L08 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SUSD3Q96L08 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SUSD3Q96L08 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.92■□□□□ 0.78
SUSD3Q96L08 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
SUSD3Q96L08 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
SUSD3Q96L08 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 HLA-F-220ENST00000434407 884 ntBASIC19.91■□□□□ 0.78
SUSD3Q96L08 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.91■□□□□ 0.78
SUSD3Q96L08 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.91■□□□□ 0.78
SUSD3Q96L08 AC010240.3-201ENST00000607688 395 ntBASIC19.91■□□□□ 0.78
SUSD3Q96L08 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.91■□□□□ 0.78
SUSD3Q96L08 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.91■□□□□ 0.78
SUSD3Q96L08 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 AC006333.2-201ENST00000607957 2099 ntBASIC19.91■□□□□ 0.78
SUSD3Q96L08 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.91■□□□□ 0.78
SUSD3Q96L08 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SUSD3Q96L08 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.91■□□□□ 0.78
SUSD3Q96L08 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUSD3Q96L08 AC005332.7-201ENST00000614046 2005 ntBASIC19.9■□□□□ 0.78
SUSD3Q96L08 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUSD3Q96L08 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUSD3Q96L08 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SUSD3Q96L08 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUSD3Q96L08 AL645929.1-201ENST00000420084 975 ntBASIC19.9■□□□□ 0.78
SUSD3Q96L08 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
SUSD3Q96L08 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.9■□□□□ 0.78
SUSD3Q96L08 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.9■□□□□ 0.78
SUSD3Q96L08 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUSD3Q96L08 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SUSD3Q96L08 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SUSD3Q96L08 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SUSD3Q96L08 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.9■□□□□ 0.78
SUSD3Q96L08 HEIH-201ENST00000623091 1652 ntBASIC19.9■□□□□ 0.78
SUSD3Q96L08 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUSD3Q96L08 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUSD3Q96L08 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.9■□□□□ 0.78
SUSD3Q96L08 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUSD3Q96L08 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SUSD3Q96L08 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.9■□□□□ 0.78
SUSD3Q96L08 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms