Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 B3GAT3P1-201ENST00000471720 806 ntBASIC19.91■□□□□ 0.78
TRIM11Q96F44 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 MTMR9LP-203ENST00000426597 1545 ntBASIC19.91■□□□□ 0.78
TRIM11Q96F44 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM11Q96F44 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM11Q96F44 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM11Q96F44 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRIM11Q96F44 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRIM11Q96F44 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM11Q96F44 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM11Q96F44 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM11Q96F44 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRIM11Q96F44 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRIM11Q96F44 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM11Q96F44 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM11Q96F44 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM11Q96F44 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM11Q96F44 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM11Q96F44 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM11Q96F44 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM11Q96F44 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM11Q96F44 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM11Q96F44 TSPY20P-201ENST00000450910 630 ntBASIC19.89■□□□□ 0.77
TRIM11Q96F44 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRIM11Q96F44 AC011506.1-201ENST00000474329 610 ntBASIC19.89■□□□□ 0.77
TRIM11Q96F44 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.89■□□□□ 0.77
TRIM11Q96F44 AC073592.3-201ENST00000625118 1834 ntBASIC19.89■□□□□ 0.77
TRIM11Q96F44 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM11Q96F44 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM11Q96F44 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM11Q96F44 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM11Q96F44 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM11Q96F44 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM11Q96F44 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM11Q96F44 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM11Q96F44 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.88■□□□□ 0.77
TRIM11Q96F44 AC008040.2-201ENST00000461049 708 ntBASIC19.88■□□□□ 0.77
TRIM11Q96F44 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRIM11Q96F44 AP000692.2-201ENST00000608391 879 ntBASIC19.88■□□□□ 0.77
TRIM11Q96F44 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM11Q96F44 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM11Q96F44 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM11Q96F44 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM11Q96F44 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM11Q96F44 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms