Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 TSPY23P-201ENST00000440136 739 ntBASIC14.87□□□□□ -0.03
NPIPB3Q92617 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 AC004264.1-201ENST00000608354 794 ntBASIC14.87□□□□□ -0.03
NPIPB3Q92617 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 HLA-A-209ENST00000638375 975 ntBASIC14.87□□□□□ -0.03
NPIPB3Q92617 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPB3Q92617 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPB3Q92617 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPB3Q92617 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NPIPB3Q92617 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 C1QL1P1-201ENST00000568105 661 ntBASIC14.85□□□□□ -0.03
NPIPB3Q92617 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NPIPB3Q92617 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPB3Q92617 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms