Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLL1Q8TB92 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLL1Q8TB92 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLL1Q8TB92 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLL1Q8TB92 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HMGCLL1Q8TB92 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLL1Q8TB92 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGCLL1Q8TB92 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLL1Q8TB92 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLL1Q8TB92 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.48■□□□□ 0.55
HMGCLL1Q8TB92 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 AC097488.1-201ENST00000507834 756 ntBASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HMGCLL1Q8TB92 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 TSPY15P-201ENST00000457163 923 ntBASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 NOC2LP1-202ENST00000452600 2235 ntBASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLL1Q8TB92 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms