Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 AL441883.1-201ENST00000566170 1045 ntBASIC19.76■□□□□ 0.75
TTC16Q8NEE8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.76■□□□□ 0.75
TTC16Q8NEE8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 UPK3BP1-201ENST00000428678 509 ntBASIC19.75■□□□□ 0.75
TTC16Q8NEE8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 TSPY23P-201ENST00000440136 739 ntBASIC19.75■□□□□ 0.75
TTC16Q8NEE8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.75■□□□□ 0.75
TTC16Q8NEE8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 Z82202.1-201ENST00000623446 1880 ntBASIC19.74■□□□□ 0.75
TTC16Q8NEE8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TTC16Q8NEE8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.73■□□□□ 0.75
TTC16Q8NEE8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.73■□□□□ 0.75
TTC16Q8NEE8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms