Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 CROCCP3-202ENST00000420820 1947 ntBASIC20.59■□□□□ 0.89
RDH13Q8NBN7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RDH13Q8NBN7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.58■□□□□ 0.89
RDH13Q8NBN7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
RDH13Q8NBN7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.58■□□□□ 0.88
RDH13Q8NBN7 KRT8P3-201ENST00000519669 1449 ntBASIC20.58■□□□□ 0.88
RDH13Q8NBN7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RDH13Q8NBN7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RDH13Q8NBN7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RDH13Q8NBN7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RDH13Q8NBN7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RDH13Q8NBN7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 BX088651.1-201ENST00000540551 451 ntBASIC20.57■□□□□ 0.88
RDH13Q8NBN7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 AL512353.2-201ENST00000448759 1962 ntBASIC20.57■□□□□ 0.88
RDH13Q8NBN7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RDH13Q8NBN7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 AL020996.1-203ENST00000536896 2307 ntBASIC20.56■□□□□ 0.88
RDH13Q8NBN7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RDH13Q8NBN7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RDH13Q8NBN7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RDH13Q8NBN7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.55■□□□□ 0.88
RDH13Q8NBN7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RDH13Q8NBN7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RDH13Q8NBN7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
RDH13Q8NBN7 INGX-201ENST00000359239 846 ntBASIC20.55■□□□□ 0.88
RDH13Q8NBN7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.55■□□□□ 0.88
RDH13Q8NBN7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RDH13Q8NBN7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.55■□□□□ 0.88
RDH13Q8NBN7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.55■□□□□ 0.88
RDH13Q8NBN7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms