Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 AC093525.10-201ENST00000625130 1569 ntBASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 AP000997.3-201ENST00000623333 2250 ntBASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC50Q8IVM0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 AC009113.1-201ENST00000570267 2443 ntBASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 PCDHB18P-201ENST00000524813 2368 ntBASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 AC239809.2-201ENST00000415381 517 ntBASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 AL023875.1-201ENST00000640777 796 ntBASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC50Q8IVM0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 KRASP1-201ENST00000407852 552 ntBASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CCDC50Q8IVM0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms