Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 FER1L4-210ENST00000615531 5998 ntBASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 SLC7A5P1-201ENST00000568957 537 ntBASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CROCCP3Q8IVE0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CROCCP3Q8IVE0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 AL356441.2-201ENST00000443009 864 ntBASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 PHGDH-210ENST00000641115 1638 ntBASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CROCCP3Q8IVE0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 ANO7L1-203ENST00000602586 1720 ntBASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.04■□□□□ 0.32
CROCCP3Q8IVE0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms