Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.61■□□□□ 0.25
RTTNQ86VV8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTTNQ86VV8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 IRX1P1-201ENST00000438849 1838 ntBASIC16.6■□□□□ 0.25
RTTNQ86VV8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 MESTP1-201ENST00000404287 994 ntBASIC16.6■□□□□ 0.25
RTTNQ86VV8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 AC097488.1-201ENST00000507834 756 ntBASIC16.6■□□□□ 0.25
RTTNQ86VV8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 AC026471.5-201ENST00000615068 467 ntBASIC16.6■□□□□ 0.25
RTTNQ86VV8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 DUSP5P1-201ENST00000441325 1139 ntBASIC16.6■□□□□ 0.25
RTTNQ86VV8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTTNQ86VV8 B3GAT3P1-201ENST00000471720 806 ntBASIC16.6■□□□□ 0.25
RTTNQ86VV8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.6■□□□□ 0.25
RTTNQ86VV8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.59■□□□□ 0.25
RTTNQ86VV8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.59■□□□□ 0.25
RTTNQ86VV8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.59■□□□□ 0.25
RTTNQ86VV8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RTTNQ86VV8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.59■□□□□ 0.25
RTTNQ86VV8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.59■□□□□ 0.25
RTTNQ86VV8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.59■□□□□ 0.25
RTTNQ86VV8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.59■□□□□ 0.25
RTTNQ86VV8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.59■□□□□ 0.25
RTTNQ86VV8 KRT18P56-201ENST00000507275 550 ntBASIC16.59■□□□□ 0.25
RTTNQ86VV8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.59■□□□□ 0.25
RTTNQ86VV8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms