Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 AL645608.8-201ENST00000606034 2086 ntBASIC15.66■□□□□ 0.1
ZNF546Q86UE3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 LINC02228-203ENST00000641970 1355 ntBASIC15.66■□□□□ 0.1
ZNF546Q86UE3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 FER1L4-210ENST00000615531 5998 ntBASIC15.66■□□□□ 0.1
ZNF546Q86UE3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 HLA-G-202ENST00000376815 851 ntBASIC15.66■□□□□ 0.1
ZNF546Q86UE3 HLA-G-203ENST00000376818 1127 ntBASIC15.66■□□□□ 0.1
ZNF546Q86UE3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 AL031432.3-201ENST00000607698 485 ntBASIC15.66■□□□□ 0.1
ZNF546Q86UE3 AC110285.6-201ENST00000617652 491 ntBASIC15.66■□□□□ 0.1
ZNF546Q86UE3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZNF546Q86UE3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 AC027612.3-201ENST00000413684 1047 ntBASIC15.65■□□□□ 0.1
ZNF546Q86UE3 SLC25A6P5-201ENST00000435663 894 ntBASIC15.65■□□□□ 0.1
ZNF546Q86UE3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 SLC7A5P1-201ENST00000568957 537 ntBASIC15.65■□□□□ 0.1
ZNF546Q86UE3 AC083906.6-201ENST00000641366 219 ntBASIC15.65■□□□□ 0.1
ZNF546Q86UE3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 AD000864.1-201ENST00000624076 2295 ntBASIC15.65■□□□□ 0.1
ZNF546Q86UE3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZNF546Q86UE3 AC135776.1-201ENST00000319817 2481 ntBASIC15.65■□□□□ 0.1
ZNF546Q86UE3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.64■□□□□ 0.09
ZNF546Q86UE3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ZNF546Q86UE3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms