Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 AL138781.2-201ENST00000617896 1843 ntBASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 CROCCP3-202ENST00000420820 1947 ntBASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
MRPL55Q7Z7F7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 FEM1AP3-201ENST00000403722 1741 ntBASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 HLA-L-209ENST00000420110 1011 ntBASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 TSPY21P-201ENST00000433481 731 ntBASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
MRPL55Q7Z7F7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
MRPL55Q7Z7F7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms