Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 AL109923.1-201ENST00000618799 583 ntBASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 AP000997.3-201ENST00000623333 2250 ntBASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 KRT8P8-201ENST00000434750 1448 ntBASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 YBX1P10-201ENST00000444752 975 ntBASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 AC120498.8-201ENST00000614275 531 ntBASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTCHD4Q6ZW05 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 SOX15-203ENST00000570788 1093 ntBASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 AC092666.2-201ENST00000613287 246 ntBASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 AC083906.6-201ENST00000641366 219 ntBASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTCHD4Q6ZW05 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms