Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 HEIH-201ENST00000623091 1652 ntBASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 DUSP5P2-201ENST00000426873 1033 ntBASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC00242Q5T6M2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms