Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 Z85996.1-201ENST00000494644 937 ntBASIC18.31■□□□□ 0.52
SGO1Q5FBB7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 PKD1P1-201ENST00000458669 6805 ntBASIC18.31■□□□□ 0.52
SGO1Q5FBB7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 Z98044.1-201ENST00000632503 1764 ntBASIC18.3■□□□□ 0.52
SGO1Q5FBB7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 AC009113.1-201ENST00000570267 2443 ntBASIC18.3■□□□□ 0.52
SGO1Q5FBB7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 RPS2P4-201ENST00000476944 856 ntBASIC18.3■□□□□ 0.52
SGO1Q5FBB7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 AC131212.4-201ENST00000623606 975 ntBASIC18.3■□□□□ 0.52
SGO1Q5FBB7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SGO1Q5FBB7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 RPPH1-201ENST00000516869 333 ntBASIC18.29■□□□□ 0.52
SGO1Q5FBB7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 AC093525.10-201ENST00000625130 1569 ntBASIC18.29■□□□□ 0.52
SGO1Q5FBB7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SGO1Q5FBB7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SGO1Q5FBB7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SGO1Q5FBB7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SGO1Q5FBB7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.28■□□□□ 0.52
SGO1Q5FBB7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SGO1Q5FBB7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.28■□□□□ 0.52
SGO1Q5FBB7 AC007613.1-201ENST00000572811 2597 ntBASIC18.28■□□□□ 0.52
SGO1Q5FBB7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SGO1Q5FBB7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SGO1Q5FBB7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms