Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 AC104417.2-201ENST00000562989 1793 ntBASIC14.41□□□□□ -0.1
HIST1H1AQ02539 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST1H1AQ02539 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 AC006333.2-201ENST00000607957 2099 ntBASIC14.4□□□□□ -0.1
HIST1H1AQ02539 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 HLA-L-209ENST00000420110 1011 ntBASIC14.4□□□□□ -0.1
HIST1H1AQ02539 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H1AQ02539 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 POM121L13P-201ENST00000422362 380 ntBASIC14.39□□□□□ -0.11
HIST1H1AQ02539 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 RNA5SP413-201ENST00000516373 109 ntBASIC14.39□□□□□ -0.11
HIST1H1AQ02539 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms