Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
AP3S2P59780 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 TFP1-202ENST00000475455 1573 ntBASIC16.17■□□□□ 0.18
AP3S2P59780 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.17■□□□□ 0.18
AP3S2P59780 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.17■□□□□ 0.18
AP3S2P59780 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
AP3S2P59780 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.17■□□□□ 0.18
AP3S2P59780 KRT18P68-201ENST00000392293 1000 ntBASIC16.17■□□□□ 0.18
AP3S2P59780 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.17■□□□□ 0.18
AP3S2P59780 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 AC106739.1-201ENST00000617035 715 ntBASIC16.17■□□□□ 0.18
AP3S2P59780 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
AP3S2P59780 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
AP3S2P59780 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AP3S2P59780 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
AP3S2P59780 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
AP3S2P59780 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
AP3S2P59780 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP3S2P59780 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.16■□□□□ 0.18
AP3S2P59780 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.16■□□□□ 0.18
AP3S2P59780 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.16■□□□□ 0.18
AP3S2P59780 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.16■□□□□ 0.18
AP3S2P59780 AC027612.3-201ENST00000413684 1047 ntBASIC16.16■□□□□ 0.18
AP3S2P59780 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.16■□□□□ 0.18
AP3S2P59780 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
AP3S2P59780 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.16■□□□□ 0.18
AP3S2P59780 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.16■□□□□ 0.18
AP3S2P59780 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.16■□□□□ 0.18
AP3S2P59780 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
AP3S2P59780 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AP3S2P59780 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
AP3S2P59780 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP3S2P59780 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.15■□□□□ 0.18
AP3S2P59780 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.15■□□□□ 0.18
AP3S2P59780 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
AP3S2P59780 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 TERF1P5-201ENST00000477545 1207 ntBASIC16.15■□□□□ 0.18
AP3S2P59780 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.15■□□□□ 0.18
AP3S2P59780 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
AP3S2P59780 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.15■□□□□ 0.18
AP3S2P59780 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
AP3S2P59780 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.15■□□□□ 0.18
AP3S2P59780 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP3S2P59780 AC012317.2-201ENST00000623305 2251 ntBASIC16.15■□□□□ 0.18
AP3S2P59780 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.15■□□□□ 0.18
AP3S2P59780 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms