Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC25A1P53007 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC25A1P53007 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC25A1P53007 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC25A1P53007 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC25A1P53007 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SLC25A1P53007 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC25A1P53007 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC25A1P53007 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC25A1P53007 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC25A1P53007 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC25A1P53007 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC25A1P53007 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SLC25A1P53007 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC25A1P53007 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC25A1P53007 AC112777.1-201ENST00000540175 1423 ntBASIC16.73■□□□□ 0.27
SLC25A1P53007 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC25A1P53007 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC25A1P53007 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC25A1P53007 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
SLC25A1P53007 ESRRAP1-201ENST00000400596 1257 ntBASIC16.73■□□□□ 0.27
SLC25A1P53007 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC25A1P53007 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.73■□□□□ 0.27
SLC25A1P53007 KSR1P1-201ENST00000446298 240 ntBASIC16.73■□□□□ 0.27
SLC25A1P53007 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.73■□□□□ 0.27
SLC25A1P53007 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SLC25A1P53007 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC25A1P53007 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
SLC25A1P53007 AC020763.4-201ENST00000623414 4170 ntBASIC16.73■□□□□ 0.27
SLC25A1P53007 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC25A1P53007 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC25A1P53007 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC25A1P53007 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC25A1P53007 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
SLC25A1P53007 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 AC004951.3-201ENST00000418645 1148 ntBASIC16.72■□□□□ 0.27
SLC25A1P53007 AC091390.4-202ENST00000476426 537 ntBASIC16.72■□□□□ 0.27
SLC25A1P53007 AP002982.1-201ENST00000492365 877 ntBASIC16.72■□□□□ 0.27
SLC25A1P53007 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.72■□□□□ 0.27
SLC25A1P53007 KRT18P6-201ENST00000555540 1265 ntBASIC16.72■□□□□ 0.27
SLC25A1P53007 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC25A1P53007 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC25A1P53007 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC25A1P53007 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC25A1P53007 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC25A1P53007 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC25A1P53007 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC25A1P53007 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC25A1P53007 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
SLC25A1P53007 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms