Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
KRT9P35527 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
KRT9P35527 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT9P35527 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT9P35527 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
KRT9P35527 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT9P35527 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT9P35527 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT9P35527 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT9P35527 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT9P35527 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT9P35527 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT9P35527 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT9P35527 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
KRT9P35527 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KRT9P35527 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT9P35527 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
KRT9P35527 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT9P35527 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KRT9P35527 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT9P35527 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT9P35527 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT9P35527 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.6■□□□□ 0.89
KRT9P35527 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT9P35527 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT9P35527 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
KRT9P35527 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
KRT9P35527 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT9P35527 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT9P35527 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT9P35527 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT9P35527 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.59■□□□□ 0.89
KRT9P35527 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.59■□□□□ 0.89
KRT9P35527 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT9P35527 TSPY21P-201ENST00000433481 731 ntBASIC20.59■□□□□ 0.89
KRT9P35527 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT9P35527 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT9P35527 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KRT9P35527 AC124016.1-201ENST00000609552 612 ntBASIC20.59■□□□□ 0.89
KRT9P35527 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT9P35527 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
KRT9P35527 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
KRT9P35527 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT9P35527 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.58■□□□□ 0.89
KRT9P35527 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRT9P35527 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT9P35527 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.58■□□□□ 0.89
KRT9P35527 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.58■□□□□ 0.89
KRT9P35527 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRT9P35527 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
KRT9P35527 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
KRT9P35527 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT9P35527 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.58■□□□□ 0.89
KRT9P35527 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT9P35527 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT9P35527 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT9P35527 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT9P35527 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.58■□□□□ 0.89
KRT9P35527 TSPY20P-201ENST00000450910 630 ntBASIC20.58■□□□□ 0.89
KRT9P35527 KRT16P5-201ENST00000455284 522 ntBASIC20.58■□□□□ 0.89
KRT9P35527 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms