Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN6P29350 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN6P29350 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN6P29350 LETM1P2-201ENST00000597330 2178 ntBASIC17.89■□□□□ 0.45
PTPN6P29350 AC073592.3-201ENST00000625118 1834 ntBASIC17.88■□□□□ 0.45
PTPN6P29350 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN6P29350 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PTPN6P29350 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPN6P29350 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN6P29350 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.88■□□□□ 0.45
PTPN6P29350 AC233702.5-201ENST00000584107 538 ntBASIC17.88■□□□□ 0.45
PTPN6P29350 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN6P29350 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PTPN6P29350 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PTPN6P29350 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PTPN6P29350 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN6P29350 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PTPN6P29350 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN6P29350 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PTPN6P29350 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN6P29350 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN6P29350 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.87■□□□□ 0.45
PTPN6P29350 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.87■□□□□ 0.45
PTPN6P29350 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN6P29350 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.87■□□□□ 0.45
PTPN6P29350 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN6P29350 HTR7P1-201ENST00000538670 1336 ntBASIC17.87■□□□□ 0.45
PTPN6P29350 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.87■□□□□ 0.45
PTPN6P29350 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PTPN6P29350 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PTPN6P29350 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPN6P29350 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPN6P29350 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTPN6P29350 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTPN6P29350 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPN6P29350 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPN6P29350 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PTPN6P29350 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN6P29350 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN6P29350 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN6P29350 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN6P29350 AC126763.1-201ENST00000552015 2118 ntBASIC17.86■□□□□ 0.45
PTPN6P29350 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN6P29350 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN6P29350 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPN6P29350 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PTPN6P29350 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.86■□□□□ 0.45
PTPN6P29350 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN6P29350 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 Z85996.1-201ENST00000494644 937 ntBASIC17.86■□□□□ 0.45
PTPN6P29350 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN6P29350 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PTPN6P29350 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN6P29350 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.86■□□□□ 0.45
PTPN6P29350 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPN6P29350 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPN6P29350 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.85■□□□□ 0.45
PTPN6P29350 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTPN6P29350 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms