Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN3P26045 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN3P26045 AP006294.2-201ENST00000641667 209 ntBASIC19.2■□□□□ 0.66
PTPN3P26045 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN3P26045 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.2■□□□□ 0.66
PTPN3P26045 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN3P26045 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN3P26045 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN3P26045 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN3P26045 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN3P26045 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN3P26045 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN3P26045 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PTPN3P26045 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN3P26045 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN3P26045 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
PTPN3P26045 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTPN3P26045 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN3P26045 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN3P26045 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PTPN3P26045 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN3P26045 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN3P26045 AC008622.2-201ENST00000617006 1229 ntBASIC19.19■□□□□ 0.66
PTPN3P26045 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN3P26045 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN3P26045 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN3P26045 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN3P26045 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN3P26045 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPN3P26045 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN3P26045 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN3P26045 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 CRYGFP-201ENST00000418459 633 ntBASIC19.18■□□□□ 0.66
PTPN3P26045 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN3P26045 SNORA78-201ENST00000459373 127 ntBASIC19.18■□□□□ 0.66
PTPN3P26045 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.18■□□□□ 0.66
PTPN3P26045 MIR4785-201ENST00000585005 73 ntBASIC19.18■□□□□ 0.66
PTPN3P26045 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 RCC2P3-201ENST00000418112 1537 ntBASIC19.18■□□□□ 0.66
PTPN3P26045 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PTPN3P26045 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN3P26045 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
PTPN3P26045 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.17■□□□□ 0.66
PTPN3P26045 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
PTPN3P26045 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN3P26045 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 RBM17P1-201ENST00000453646 1190 ntBASIC19.17■□□□□ 0.66
PTPN3P26045 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN3P26045 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PTPN3P26045 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PTPN3P26045 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN3P26045 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN3P26045 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PTPN3P26045 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN3P26045 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN3P26045 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN3P26045 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN3P26045 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN3P26045 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms