Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 FITM1-202ENST00000559294 800 ntBASIC18.88■□□□□ 0.61
THRAP10827 AC026271.3-201ENST00000571884 352 ntBASIC18.88■□□□□ 0.61
THRAP10827 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.88■□□□□ 0.61
THRAP10827 AL031985.4-201ENST00000642138 673 ntBASIC18.88■□□□□ 0.61
THRAP10827 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.88■□□□□ 0.61
THRAP10827 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.88■□□□□ 0.61
THRAP10827 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
THRAP10827 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
THRAP10827 AC009113.1-201ENST00000570267 2443 ntBASIC18.88■□□□□ 0.61
THRAP10827 AC104581.1-202ENST00000635932 2618 ntBASIC18.87■□□□□ 0.61
THRAP10827 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
THRAP10827 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.87■□□□□ 0.61
THRAP10827 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
THRAP10827 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.87■□□□□ 0.61
THRAP10827 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.87■□□□□ 0.61
THRAP10827 AL390955.1-201ENST00000428694 934 ntBASIC18.87■□□□□ 0.61
THRAP10827 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.87■□□□□ 0.61
THRAP10827 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.87■□□□□ 0.61
THRAP10827 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.87■□□□□ 0.61
THRAP10827 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
THRAP10827 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
THRAP10827 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.87■□□□□ 0.61
THRAP10827 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.87■□□□□ 0.61
THRAP10827 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.87■□□□□ 0.61
THRAP10827 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
THRAP10827 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.87■□□□□ 0.61
THRAP10827 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
THRAP10827 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
THRAP10827 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
THRAP10827 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.87■□□□□ 0.61
THRAP10827 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
THRAP10827 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
THRAP10827 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
THRAP10827 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.86■□□□□ 0.61
THRAP10827 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
THRAP10827 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.86■□□□□ 0.61
THRAP10827 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 TUBB8P6-201ENST00000436895 1288 ntBASIC18.86■□□□□ 0.61
THRAP10827 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
THRAP10827 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
THRAP10827 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.86■□□□□ 0.61
THRAP10827 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
THRAP10827 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.86■□□□□ 0.61
THRAP10827 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
THRAP10827 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
THRAP10827 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
THRAP10827 AL390961.4-201ENST00000623958 2535 ntBASIC18.85■□□□□ 0.61
THRAP10827 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.85■□□□□ 0.61
THRAP10827 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THRAP10827 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
THRAP10827 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THRAP10827 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THRAP10827 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
THRAP10827 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.85■□□□□ 0.61
THRAP10827 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THRAP10827 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
THRAP10827 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
THRAP10827 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
THRAP10827 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms