Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
UBCP0CG48 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.52■□□□□ 0.24
UBCP0CG48 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.52■□□□□ 0.24
UBCP0CG48 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.52■□□□□ 0.24
UBCP0CG48 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.52■□□□□ 0.24
UBCP0CG48 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.52■□□□□ 0.24
UBCP0CG48 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.52■□□□□ 0.24
UBCP0CG48 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.52■□□□□ 0.24
UBCP0CG48 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.52■□□□□ 0.24
UBCP0CG48 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 AC142086.2-201ENST00000569753 217 ntBASIC16.52■□□□□ 0.24
UBCP0CG48 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
UBCP0CG48 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.52■□□□□ 0.24
UBCP0CG48 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.52■□□□□ 0.24
UBCP0CG48 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.52■□□□□ 0.24
UBCP0CG48 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.52■□□□□ 0.24
UBCP0CG48 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.52■□□□□ 0.24
UBCP0CG48 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.52■□□□□ 0.24
UBCP0CG48 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
UBCP0CG48 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.52■□□□□ 0.24
UBCP0CG48 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBCP0CG48 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBCP0CG48 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBCP0CG48 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.52■□□□□ 0.23
UBCP0CG48 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBCP0CG48 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.52■□□□□ 0.23
UBCP0CG48 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
UBCP0CG48 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
UBCP0CG48 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
UBCP0CG48 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.51■□□□□ 0.23
UBCP0CG48 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBCP0CG48 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.51■□□□□ 0.23
UBCP0CG48 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.51■□□□□ 0.23
UBCP0CG48 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBCP0CG48 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.51■□□□□ 0.23
UBCP0CG48 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.51■□□□□ 0.23
UBCP0CG48 UNC93B5-201ENST00000530315 699 ntBASIC16.51■□□□□ 0.23
UBCP0CG48 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.51■□□□□ 0.23
UBCP0CG48 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
UBCP0CG48 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.51■□□□□ 0.23
UBCP0CG48 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
UBCP0CG48 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.51■□□□□ 0.23
UBCP0CG48 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBCP0CG48 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
UBCP0CG48 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.5■□□□□ 0.23
UBCP0CG48 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
UBCP0CG48 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.5■□□□□ 0.23
UBCP0CG48 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.5■□□□□ 0.23
UBCP0CG48 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
UBCP0CG48 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
UBCP0CG48 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.5■□□□□ 0.23
UBCP0CG48 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.5■□□□□ 0.23
UBCP0CG48 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.5■□□□□ 0.23
UBCP0CG48 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.5■□□□□ 0.23
UBCP0CG48 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.5■□□□□ 0.23
UBCP0CG48 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UBCP0CG48 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.5■□□□□ 0.23
UBCP0CG48 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
UBCP0CG48 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.5■□□□□ 0.23
UBCP0CG48 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
UBCP0CG48 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms