Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 AL138781.2-201ENST00000617896 1843 ntBASIC19.09■□□□□ 0.65
HLA-DQB2P05538 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB2P05538 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.08■□□□□ 0.65
HLA-DQB2P05538 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
HLA-DQB2P05538 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQB2P05538 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
HLA-DQB2P05538 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQB2P05538 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 INGX-201ENST00000359239 846 ntBASIC19.08■□□□□ 0.64
HLA-DQB2P05538 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 AC008556.1-201ENST00000610908 2040 ntBASIC19.08■□□□□ 0.64
HLA-DQB2P05538 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 AC092338.2-201ENST00000568827 1415 ntBASIC19.08■□□□□ 0.64
HLA-DQB2P05538 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB2P05538 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 AP003041.3-201ENST00000527151 707 ntBASIC19.07■□□□□ 0.64
HLA-DQB2P05538 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 AL353719.1-201ENST00000566847 864 ntBASIC19.07■□□□□ 0.64
HLA-DQB2P05538 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB2P05538 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 AL109659.2-201ENST00000606809 1674 ntBASIC19.06■□□□□ 0.64
HLA-DQB2P05538 TSPY14P-201ENST00000303979 915 ntBASIC19.06■□□□□ 0.64
HLA-DQB2P05538 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 MCCD1P1-208ENST00000445732 328 ntBASIC19.06■□□□□ 0.64
HLA-DQB2P05538 CCR12P-201ENST00000446203 998 ntBASIC19.06■□□□□ 0.64
HLA-DQB2P05538 TSPY17P-201ENST00000450329 467 ntBASIC19.06■□□□□ 0.64
HLA-DQB2P05538 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 NAPSB-206ENST00000562112 1266 ntBASIC19.06■□□□□ 0.64
HLA-DQB2P05538 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 AL357033.4-201ENST00000617703 1807 ntBASIC19.06■□□□□ 0.64
HLA-DQB2P05538 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-DQB2P05538 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms